IntegrateCellLabelsResults

Wrapper around the integrated cell labelling results on the Wasm heap, typically produced by labelCells.

Methods

fineTuningDelta(optionsopt) → {Float64Array|Float64WasmArray}

Source:

labelCells.js, line 667

Parameters:

Name Type Attributes Default Description

options

object

{}

Optional parameters.

Properties

Name	Type	Attributes	Default	Description
`copy`	boolean \| string	<optional>	`true`	Copying mode, see `possibleCopy` for details.

Returns:

Array of length equal to the number of cells, containing the difference in scores between the best and second-best reference during fine-tuning.

Type: Float64Array | Float64WasmArray

free()

Source:

labelCells.js, line 675

Returns:

Frees the memory allocated on the Wasm heap for this object. This invalidates this object and all references to it.

numberOfCells() → {number}

Source:

labelCells.js, line 615

Returns:

Number of cells that were labelled.

Type: number

numberOfReferences() → {number}

Source:

labelCells.js, line 608

Returns:

Number of labels used in integrateCellLabels.

Type: number

predictedReferences(optionsopt) → {Int32Array|Int32WasmArray}

Source:

labelCells.js, line 626

Parameters:

Name Type Attributes Default Description

options

object

{}

Optional parameters.

Properties

Name	Type	Attributes	Default	Description
`copy`	boolean \| string	<optional>	`true`	Copying mode, see `possibleCopy` for details.

Returns:

Array of length equal to the number of cells, containing the index of the best reference for each cell.

Type: Int32Array | Int32WasmArray

scoresForCell(i, optionsopt) → {Float64Array|Float64WasmArray}

Source:

labelCells.js, line 641

Parameters:

Name Type Attributes Default Description

i

number

Index of the cell of interest.

options

object

{}

Optional parameters.

Properties

Name	Type	Attributes	Default	Description
`copy`	boolean \| string	<optional>	`true`	Copying mode, see `possibleCopy` for details. Only used if `buffer` is not supplied.
`buffer`	Float64WasmArray	<optional> <nullable>	`null`	Buffer in which to store the output. This should have the same length as the `numberOfLabels`.

Returns:

Array containing the scores for this cell across all references. If buffer is supplied, it is used as the return value.

Type: Float64Array | Float64WasmArray

scoresForReference(i, optionsopt) → {Float64Array|Float64WasmArray}

Source:

labelCells.js, line 656

Parameters:

Name Type Attributes Default Description

i

number

Index of the reference of interest.

options

object

{}

Optional parameters.

Properties

Name	Type	Attributes	Default	Description
`copy`	boolean \| string	<optional>	`true`	Copying mode, see `possibleCopy` for details. Only used if `buffer` is not supplied.
`buffer`	Float64WasmArray	<optional> <nullable>	`null`	Buffer in which to store the output. This should have the same length as the `numberOfCells`.

Returns:

Array containing the scores across all cells for this label. If buffer is supplied, it is used as the return value.

Type: Float64Array | Float64WasmArray